MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Shigella flexneri 19428wH2_1568

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PROKKA Genome Annotation:

contigs: 237

bases: 5,139,722 bps

CDS: 4,826

rRNA: 10

Repeat region:

tmRNA: 1

tRNA: 89

misc RNA:

Total features: 4,926

Total number of protein coding genes annotated/found: 4,826

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Molecule	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range ^	Gene Product Name
SEQF5015\|JADGKR010000006.1	SEQF5015_04163	NA AA	1191/397	1402-212	Aspartate aminotransferase
SEQF5015\|JADGKR010000006.1	SEQF5015_04164	NA AA	1089/363	2675-1587	Outer membrane porin F
SEQF5015\|JADGKR010000006.1	SEQF5015_04165	NA AA	1401/467	4677-3277	Asparagine--tRNA ligase
SEQF5015\|JADGKR010000006.1	SEQF5015_04166	NA AA	1203/401	6048-4846	Nicotinate phosphoribosyltransferase
SEQF5015\|JADGKR010000006.1	SEQF5015_04167	NA AA	2613/871	6314-8926	Aminopeptidase N
SEQF5015\|JADGKR010000006.1	SEQF5015_04168	NA AA	768/256	9900-9133	Aliphatic sulfonates import ATP-binding protein SsuB
SEQF5015\|JADGKR010000006.1	SEQF5015_04169	NA AA	792/264	10688-9897	Putative aliphatic sulfonates transport permease protein SsuC
SEQF5015\|JADGKR010000006.1	SEQF5015_04170	NA AA	1146/382	11844-10699	Alkanesulfonate monooxygenase
SEQF5015\|JADGKR010000006.1	SEQF5015_04171	NA AA	960/320	12800-11841	Putative aliphatic sulfonates-binding protein
SEQF5015\|JADGKR010000006.1	SEQF5015_04172	NA AA	576/192	13368-12793	FMN reductase (NADPH)
SEQF5015\|JADGKR010000006.1	SEQF5015_04173	NA AA	543/181	13724-14266	Laminin-binding fimbrial subunit ElfA
SEQF5015\|JADGKR010000006.1	SEQF5015_04174	NA AA	702/234	14349-15050	putative fimbrial chaperone protein ElfD
SEQF5015\|JADGKR010000006.1	SEQF5015_04175	NA AA	2601/867	15075-17675	putative outer membrane usher protein ElfC
SEQF5015\|JADGKR010000006.1	SEQF5015_04176	NA AA	1071/357	17666-18736	putative fimbrial-like protein ElfG
SEQF5015\|JADGKR010000006.1	SEQF5015_04177	NA AA	543/181	18748-19290	putative fimbrial-like protein YcbU
SEQF5015\|JADGKR010000006.1	SEQF5015_04178	NA AA	564/188	19250-19813	putative fimbrial-like protein YcbV
SEQF5015\|JADGKR010000006.1	SEQF5015_04179	NA AA	690/230	19827-20516	putative fimbrial chaperone YcbF
SEQF5015\|JADGKR010000006.1	SEQF5015_04180	NA AA	1011/337	20627-21637	Dihydroorotate dehydrogenase (quinone)
SEQF5015\|JADGKR010000006.1	SEQF5015_04181	NA AA	543/181	21811-22353	Cell division protein ZapC
SEQF5015\|JADGKR010000006.1	SEQF5015_04182	NA AA	1110/370	23459-22350	putative protein YcbX

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Page last updated: July 7, 2021 08:39:35